Hello,
after having a version mismatch between Avro in Flink 1.3.2 I decided to see how things work with Flink 1.4.0. The pipeline I am building runs now, deployed as standalone on YARN with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro 1.8.2 instead of an 1.7.x version). The default setting for yarn.per-job-cluster.include-user-jar is ORDERED which in my case was a bit tricky, because I first deployed a pipeline having a jar starting with "A" so it was placed before the flink jars, later I worked on a mostly identical pipeline with a name a bit further down in the alphabet, and that was placed behind the flink jars causing various issues. I would recommend to change this as default to LAST. Then the jar name has no impact on how things are loaded. Should I open a jira for this? Now after updating to Flink 1.4.0 and also running on YARN as standalone I am getting null values in a map field I did set in earlier steps in the pipeline on Avro objects. The thing is a bit weird, because avroObject.toString would show the values just fine, but I get null on retrieval. I have my own TableInputFormat to read from HBase and output a Tuple2 containing an Avro object. Next comes a map which tries to access it. The failing piece looks like this: ao.getTheMap().get("theKey") (returns null) Doing an ao.toString would show the "theMap" and the value of "theKey". Is this a bug in Flink 1.4.0 or is there something wrong with my dependencies? Thanks, Jörn |
Hi Jörn,
could you tell us a bit more about your job? Did you import the flink-avro module? How does the Flink TypeInformation for your Avro type look like using println(ds.getType)? It sounds like a very weird error if the toString() method shows the key. Can you reproduce the error in your IDE and enter the `get("theKey")` method using a debugger. I will loop in Aljoscha that worked on Avro recently. Regards, Timo Am 12/7/17 um 3:19 PM schrieb Joern Kottmann: > Hello, > > after having a version mismatch between Avro in Flink 1.3.2 I decided > to see how things work with Flink 1.4.0. > > The pipeline I am building runs now, deployed as standalone on YARN > with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro > 1.8.2 instead of an 1.7.x version). > > The default setting for yarn.per-job-cluster.include-user-jar is > ORDERED which in my case was a bit tricky, because I first deployed a > pipeline having a jar starting with "A" so it was placed before the > flink jars, later I worked on a mostly identical pipeline with a name > a bit further down in the alphabet, and that was placed behind the > flink jars causing various issues. I would recommend to change this as > default to LAST. Then the jar name has no impact on how things are > loaded. > Should I open a jira for this? > > Now after updating to Flink 1.4.0 and also running on YARN as > standalone I am getting null values in a map field I did set in > earlier steps in the pipeline on Avro objects. The thing is a bit > weird, because avroObject.toString would show the values just fine, > but I get null on retrieval. > > I have my own TableInputFormat to read from HBase and output a Tuple2 > containing an Avro object. > Next comes a map which tries to access it. > > The failing piece looks like this: > ao.getTheMap().get("theKey") (returns null) > Doing an ao.toString would show the "theMap" and the value of "theKey". > > Is this a bug in Flink 1.4.0 or is there something wrong with my dependencies? > > Thanks, > Jörn |
Can you also check the type of the keys in your map. Avro distinguished
between String and Utf8 class. Maybe this is why your key cannot be found. Regards, Timo Am 12/7/17 um 3:54 PM schrieb Timo Walther: > Hi Jörn, > > could you tell us a bit more about your job? Did you import the > flink-avro module? How does the Flink TypeInformation for your Avro > type look like using println(ds.getType)? It sounds like a very weird > error if the toString() method shows the key. Can you reproduce the > error in your IDE and enter the `get("theKey")` method using a > debugger. I will loop in Aljoscha that worked on Avro recently. > > Regards, > Timo > > > > Am 12/7/17 um 3:19 PM schrieb Joern Kottmann: >> Hello, >> >> after having a version mismatch between Avro in Flink 1.3.2 I decided >> to see how things work with Flink 1.4.0. >> >> The pipeline I am building runs now, deployed as standalone on YARN >> with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro >> 1.8.2 instead of an 1.7.x version). >> >> The default setting for yarn.per-job-cluster.include-user-jar is >> ORDERED which in my case was a bit tricky, because I first deployed a >> pipeline having a jar starting with "A" so it was placed before the >> flink jars, later I worked on a mostly identical pipeline with a name >> a bit further down in the alphabet, and that was placed behind the >> flink jars causing various issues. I would recommend to change this as >> default to LAST. Then the jar name has no impact on how things are >> loaded. >> Should I open a jira for this? >> >> Now after updating to Flink 1.4.0 and also running on YARN as >> standalone I am getting null values in a map field I did set in >> earlier steps in the pipeline on Avro objects. The thing is a bit >> weird, because avroObject.toString would show the values just fine, >> but I get null on retrieval. >> >> I have my own TableInputFormat to read from HBase and output a Tuple2 >> containing an Avro object. >> Next comes a map which tries to access it. >> >> The failing piece looks like this: >> ao.getTheMap().get("theKey") (returns null) >> Doing an ao.toString would show the "theMap" and the value of "theKey". >> >> Is this a bug in Flink 1.4.0 or is there something wrong with my >> dependencies? >> >> Thanks, >> Jörn > |
Hello Timo,
thanks for your quick response. I can't share the code of that pipeline here. The Flink version I am using is this one: http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz That was compiled by me with mvn install -DskipTests (for some reason the tests failed, can also share that, maybe a firewall issue on Fedora 27). I managed to isolate the problem and it can be reproduced with a few lines running in the IDE: https://github.com/kottmann/flink-avro-issue And it is indeed like you suspected, the key is a Utf8, and I pass in a String to the get. But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? Thanks again! Jörn On Thu, Dec 7, 2017 at 5:07 PM, Joern Kottmann <[hidden email]> wrote: > Hello Timo, > > thanks for your quick response. I can't share the code of that pipeline here. > > The Flink version I am using is this one: > http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz > > That was compiled by me with mvn install -DskipTests (for some reason > the tests failed, can also share that, maybe a firewall issue on > Fedora 27). > > I managed to isolate the problem and it can be reproduced with a few > lines running in the IDE: > https://github.com/kottmann/flink-avro-issue > > And it is indeed like you suspected, the key is a Utf8, and I pass in > a String to the get. > > But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? > > Thanks again! > Jörn > > On Thu, Dec 7, 2017 at 3:57 PM, Timo Walther <[hidden email]> wrote: >> Can you also check the type of the keys in your map. Avro distinguished >> between String and Utf8 class. Maybe this is why your key cannot be found. >> >> Regards, >> Timo >> >> >> Am 12/7/17 um 3:54 PM schrieb Timo Walther: >> >>> Hi Jörn, >>> >>> could you tell us a bit more about your job? Did you import the flink-avro >>> module? How does the Flink TypeInformation for your Avro type look like >>> using println(ds.getType)? It sounds like a very weird error if the >>> toString() method shows the key. Can you reproduce the error in your IDE and >>> enter the `get("theKey")` method using a debugger. I will loop in Aljoscha >>> that worked on Avro recently. >>> >>> Regards, >>> Timo >>> >>> >>> >>> Am 12/7/17 um 3:19 PM schrieb Joern Kottmann: >>>> >>>> Hello, >>>> >>>> after having a version mismatch between Avro in Flink 1.3.2 I decided >>>> to see how things work with Flink 1.4.0. >>>> >>>> The pipeline I am building runs now, deployed as standalone on YARN >>>> with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro >>>> 1.8.2 instead of an 1.7.x version). >>>> >>>> The default setting for yarn.per-job-cluster.include-user-jar is >>>> ORDERED which in my case was a bit tricky, because I first deployed a >>>> pipeline having a jar starting with "A" so it was placed before the >>>> flink jars, later I worked on a mostly identical pipeline with a name >>>> a bit further down in the alphabet, and that was placed behind the >>>> flink jars causing various issues. I would recommend to change this as >>>> default to LAST. Then the jar name has no impact on how things are >>>> loaded. >>>> Should I open a jira for this? >>>> >>>> Now after updating to Flink 1.4.0 and also running on YARN as >>>> standalone I am getting null values in a map field I did set in >>>> earlier steps in the pipeline on Avro objects. The thing is a bit >>>> weird, because avroObject.toString would show the values just fine, >>>> but I get null on retrieval. >>>> >>>> I have my own TableInputFormat to read from HBase and output a Tuple2 >>>> containing an Avro object. >>>> Next comes a map which tries to access it. >>>> >>>> The failing piece looks like this: >>>> ao.getTheMap().get("theKey") (returns null) >>>> Doing an ao.toString would show the "theMap" and the value of "theKey". >>>> >>>> Is this a bug in Flink 1.4.0 or is there something wrong with my >>>> dependencies? >>>> >>>> Thanks, >>>> Jörn >>> >>> >> |
Hi Jörn,
thanks for the little example. Maybe Avro changed the behavior about maps from the old version we used in 1.3 to the newest version in Flink 1.4.0. I will investigate this and might open an issue for it. Regards, Timo Am 12/7/17 um 5:07 PM schrieb Joern Kottmann: > Hello Timo, > > thanks for your quick response. I can't share the code of that pipeline here. > > The Flink version I am using is this one: > http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz > > That was compiled by me with mvn install -DskipTests (for some reason > the tests failed, can also share that, maybe a firewall issue on > Fedora 27). > > I managed to isolate the problem and it can be reproduced with a few > lines running in the IDE: > https://github.com/kottmann/flink-avro-issue > > And it is indeed like you suspected, the key is a Utf8, and I pass in > a String to the get. > > But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? > > Thanks again! > Jörn > > On Thu, Dec 7, 2017 at 5:07 PM, Joern Kottmann <[hidden email]> wrote: >> Hello Timo, >> >> thanks for your quick response. I can't share the code of that pipeline here. >> >> The Flink version I am using is this one: >> http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz >> >> That was compiled by me with mvn install -DskipTests (for some reason >> the tests failed, can also share that, maybe a firewall issue on >> Fedora 27). >> >> I managed to isolate the problem and it can be reproduced with a few >> lines running in the IDE: >> https://github.com/kottmann/flink-avro-issue >> >> And it is indeed like you suspected, the key is a Utf8, and I pass in >> a String to the get. >> >> But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? >> >> Thanks again! >> Jörn >> >> On Thu, Dec 7, 2017 at 3:57 PM, Timo Walther <[hidden email]> wrote: >>> Can you also check the type of the keys in your map. Avro distinguished >>> between String and Utf8 class. Maybe this is why your key cannot be found. >>> >>> Regards, >>> Timo >>> >>> >>> Am 12/7/17 um 3:54 PM schrieb Timo Walther: >>> >>>> Hi Jörn, >>>> >>>> could you tell us a bit more about your job? Did you import the flink-avro >>>> module? How does the Flink TypeInformation for your Avro type look like >>>> using println(ds.getType)? It sounds like a very weird error if the >>>> toString() method shows the key. Can you reproduce the error in your IDE and >>>> enter the `get("theKey")` method using a debugger. I will loop in Aljoscha >>>> that worked on Avro recently. >>>> >>>> Regards, >>>> Timo >>>> >>>> >>>> >>>> Am 12/7/17 um 3:19 PM schrieb Joern Kottmann: >>>>> Hello, >>>>> >>>>> after having a version mismatch between Avro in Flink 1.3.2 I decided >>>>> to see how things work with Flink 1.4.0. >>>>> >>>>> The pipeline I am building runs now, deployed as standalone on YARN >>>>> with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro >>>>> 1.8.2 instead of an 1.7.x version). >>>>> >>>>> The default setting for yarn.per-job-cluster.include-user-jar is >>>>> ORDERED which in my case was a bit tricky, because I first deployed a >>>>> pipeline having a jar starting with "A" so it was placed before the >>>>> flink jars, later I worked on a mostly identical pipeline with a name >>>>> a bit further down in the alphabet, and that was placed behind the >>>>> flink jars causing various issues. I would recommend to change this as >>>>> default to LAST. Then the jar name has no impact on how things are >>>>> loaded. >>>>> Should I open a jira for this? >>>>> >>>>> Now after updating to Flink 1.4.0 and also running on YARN as >>>>> standalone I am getting null values in a map field I did set in >>>>> earlier steps in the pipeline on Avro objects. The thing is a bit >>>>> weird, because avroObject.toString would show the values just fine, >>>>> but I get null on retrieval. >>>>> >>>>> I have my own TableInputFormat to read from HBase and output a Tuple2 >>>>> containing an Avro object. >>>>> Next comes a map which tries to access it. >>>>> >>>>> The failing piece looks like this: >>>>> ao.getTheMap().get("theKey") (returns null) >>>>> Doing an ao.toString would show the "theMap" and the value of "theKey". >>>>> >>>>> Is this a bug in Flink 1.4.0 or is there something wrong with my >>>>> dependencies? >>>>> >>>>> Thanks, >>>>> Jörn >>>> |
I think this Avro issue might be related: https://issues.apache.org/jira/browse/AVRO-803
> On 7. Dec 2017, at 17:19, Timo Walther <[hidden email]> wrote: > > Hi Jörn, > > thanks for the little example. Maybe Avro changed the behavior about maps from the old version we used in 1.3 to the newest version in Flink 1.4.0. > > I will investigate this and might open an issue for it. > > Regards, > Timo > > > Am 12/7/17 um 5:07 PM schrieb Joern Kottmann: >> Hello Timo, >> >> thanks for your quick response. I can't share the code of that pipeline here. >> >> The Flink version I am using is this one: >> http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz >> >> That was compiled by me with mvn install -DskipTests (for some reason >> the tests failed, can also share that, maybe a firewall issue on >> Fedora 27). >> >> I managed to isolate the problem and it can be reproduced with a few >> lines running in the IDE: >> https://github.com/kottmann/flink-avro-issue >> >> And it is indeed like you suspected, the key is a Utf8, and I pass in >> a String to the get. >> >> But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? >> >> Thanks again! >> Jörn >> >> On Thu, Dec 7, 2017 at 5:07 PM, Joern Kottmann <[hidden email]> wrote: >>> Hello Timo, >>> >>> thanks for your quick response. I can't share the code of that pipeline here. >>> >>> The Flink version I am using is this one: >>> http://people.apache.org/~aljoscha/flink-1.4.0-rc3/flink-1.4.0-src.tgz >>> >>> That was compiled by me with mvn install -DskipTests (for some reason >>> the tests failed, can also share that, maybe a firewall issue on >>> Fedora 27). >>> >>> I managed to isolate the problem and it can be reproduced with a few >>> lines running in the IDE: >>> https://github.com/kottmann/flink-avro-issue >>> >>> And it is indeed like you suspected, the key is a Utf8, and I pass in >>> a String to the get. >>> >>> But why did that now break with Flink 1.4.0 and runs on Flink 1.3.2? >>> >>> Thanks again! >>> Jörn >>> >>> On Thu, Dec 7, 2017 at 3:57 PM, Timo Walther <[hidden email]> wrote: >>>> Can you also check the type of the keys in your map. Avro distinguished >>>> between String and Utf8 class. Maybe this is why your key cannot be found. >>>> >>>> Regards, >>>> Timo >>>> >>>> >>>> Am 12/7/17 um 3:54 PM schrieb Timo Walther: >>>> >>>>> Hi Jörn, >>>>> >>>>> could you tell us a bit more about your job? Did you import the flink-avro >>>>> module? How does the Flink TypeInformation for your Avro type look like >>>>> using println(ds.getType)? It sounds like a very weird error if the >>>>> toString() method shows the key. Can you reproduce the error in your IDE and >>>>> enter the `get("theKey")` method using a debugger. I will loop in Aljoscha >>>>> that worked on Avro recently. >>>>> >>>>> Regards, >>>>> Timo >>>>> >>>>> >>>>> >>>>> Am 12/7/17 um 3:19 PM schrieb Joern Kottmann: >>>>>> Hello, >>>>>> >>>>>> after having a version mismatch between Avro in Flink 1.3.2 I decided >>>>>> to see how things work with Flink 1.4.0. >>>>>> >>>>>> The pipeline I am building runs now, deployed as standalone on YARN >>>>>> with Flink 1.3.2 and putting it "FIRST" on the classpath (to use Avro >>>>>> 1.8.2 instead of an 1.7.x version). >>>>>> >>>>>> The default setting for yarn.per-job-cluster.include-user-jar is >>>>>> ORDERED which in my case was a bit tricky, because I first deployed a >>>>>> pipeline having a jar starting with "A" so it was placed before the >>>>>> flink jars, later I worked on a mostly identical pipeline with a name >>>>>> a bit further down in the alphabet, and that was placed behind the >>>>>> flink jars causing various issues. I would recommend to change this as >>>>>> default to LAST. Then the jar name has no impact on how things are >>>>>> loaded. >>>>>> Should I open a jira for this? >>>>>> >>>>>> Now after updating to Flink 1.4.0 and also running on YARN as >>>>>> standalone I am getting null values in a map field I did set in >>>>>> earlier steps in the pipeline on Avro objects. The thing is a bit >>>>>> weird, because avroObject.toString would show the values just fine, >>>>>> but I get null on retrieval. >>>>>> >>>>>> I have my own TableInputFormat to read from HBase and output a Tuple2 >>>>>> containing an Avro object. >>>>>> Next comes a map which tries to access it. >>>>>> >>>>>> The failing piece looks like this: >>>>>> ao.getTheMap().get("theKey") (returns null) >>>>>> Doing an ao.toString would show the "theMap" and the value of "theKey". >>>>>> >>>>>> Is this a bug in Flink 1.4.0 or is there something wrong with my >>>>>> dependencies? >>>>>> >>>>>> Thanks, >>>>>> Jörn >>>>> > |
One thing to be aware of when testing Flink 1.4 is the changes to dependencies and classloading. By default, Flink 1.4 uses now inverted classloading to allow users to use their own copies of dependencies, irrespective of what the underlying classpath is spoiled with. You can for example use a different Avro versions than Hadoop pull in, even without shading, or even different Akka / Jackson / etc versions. That is a nice improvement, but it may have some impacts on tools that have been build before. When you see classcast exceptions (like X cannot be cast to X), that is probably caused by the fact that the classloader duplicates a dependency from the JVM classpath in user-space, but objects/classes move between the domains. You can always switch back the old model by adding : "classloader.resolve-order: parent-first" to the configuration. On Fri, Dec 8, 2017 at 2:13 PM, Aljoscha Krettek <[hidden email]> wrote: I think this Avro issue might be related: https://issues.apache.org/ |
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